Molecular phylogeny of convallarioideae (Asparagaceae), with emphasis on Vietnamese species

With the aim of inferring phylogenetic relationships among 86 species (including 45 species from Vietnam) mostly of the subfamily Convallarioideae (=Nolinoideae) (Asparagaceae sensu APG IV), we analyzed their chloroplast DNA sequences (rbcL and trnL-F) by both Bayesian inference (BI) and maximum likelihood (ML) methods. Our dataset included six of the seven tribes classified in this subfamily; Convallarieae, Dracaeneae, Liriopeae Nolineae, Polygonateae and Rusceae (Eriospermeae not examined). | ACADEMIA JOURNAL OF BIOLOGY 2023 45 4 93 109 DOI 2615-9023 18765 MOLECULAR PHYLOGENY OF CONVALLARIOIDEAE ASPARAGACEAE WITH EMPHASIS ON VIETNAMESE SPECIES Thi Mai Linh Le1 Ngoc Sam Ly2 3 Van The Pham4 Phuong Hanh Nguyen1 Duc Binh Tran1 Li-Na Dong5 Leonid V. Averyanov6 Noriyuki Tanaka7 Khang Sinh Nguyen1 3 1 Institute of Ecology and Biological Resources Vietnam Academy of Science and Technology 18 Hoang Quoc Viet Ha Noi Vietnam 2 Institute of Tropical Biology Vietnam Academy of Science and Technology Ho Chi Minh City Vietnam 3 Graduate University of Science and Technology Vietnam Academy of Science and Technology 18 Hoang Quoc Viet Ha Noi Vietnam 4 Science and Technology Advanced Institute Van Lang University Ho Chi Minh City Vietnam 5 Guangxi Institute of Botany Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences Guilin 541006 Guangxi China 6 Komarov Botanical Institute of the Russian Academy of Sciences 197376 St. Petersburg Russia 7 Hachioji-shi Tokyo 192-0352 Japan Received 13 September 2023 accepted 29 November 2023 ABSTRACT With the aim of inferring phylogenetic relationships among 86 species including 45 species from Vietnam mostly of the subfamily Convallarioideae Nolinoideae Asparagaceae sensu APG IV we analyzed their chloroplast DNA sequences rbcL and trnL-F by both Bayesian inference BI and maximum likelihood ML methods. Our dataset included six of the seven tribes classified in this subfamily Convallarieae Dracaeneae Liriopeae Nolineae Polygonateae and Rusceae Eriospermeae not examined . Our study supported the sisterhood between Convallarioideae and Asparagoideae and the monophyly of all the tribes except Polygonateae. Within the Convallarioideae we examined Dracaena formed the basalmost clade. Theropogon did not positively nest in any of the tribes including Convallarieae in which it had often been classified. It was weakly defined as the second basalmost branch. Ruscus Rusceae nested in Polygonateae as the sister to Maianthemum .

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