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Gen2Epi: An automated whole-genome sequencing pipeline for linking full genomes to antimicrobial susceptibility and molecular epidemiological data in Neisseria gonorrhoeae

Gen2Epi: An automated whole-genome sequencing pipeline for linking full genomes to antimicrobial susceptibility and molecular epidemiological data in Neisseria gonorrhoeae
11    54    1
De novo comparative transcriptome analysis of a rare cicada, with identification of candidate genes related to adaptation to a novel host plant and drier habitats

De novo comparative transcriptome analysis of a rare cicada, with identification of candidate genes related to adaptation to a novel host plant and drier habitats
16    42    1
In-depth transcriptome characterization uncovers distinct gene family expansions for Cupressus gigantea important to this long-lived species’ adaptability to environmental cues

In-depth transcriptome characterization uncovers distinct gene family expansions for Cupressus gigantea important to this long-lived species’ adaptability to environmental cues
14    92    1
A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds

A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds
19    74    1
De novo transcriptome and phytochemical analyses reveal differentially expressed genes and characteristic secondary metabolites in the original oolong tea (Camellia sinensis) cultivar ‘Tieguanyin’ compared with cultivar ‘Benshan’

De novo transcriptome and phytochemical analyses reveal differentially expressed genes and characteristic secondary metabolites in the original oolong tea (Camellia sinensis) cultivar ‘Tieguanyin’ compared with cultivar ‘Benshan’
24    58    2
Effects of a previously selected antibiotic resistance on mutations acquired during development of a second resistance in Escherichia coli

Effects of a previously selected antibiotic resistance on mutations acquired during development of a second resistance in Escherichia coli
14    72    1
GAPPadder: A sensitive approach for closing gaps on draft genomes with short sequence reads

GAPPadder: A sensitive approach for closing gaps on draft genomes with short sequence reads
10    212    1
Comparative transcriptome analyses of genes involved in sulforaphane metabolism at different treatment in Chinese kale using full-length transcriptome sequencing

Comparative transcriptome analyses of genes involved in sulforaphane metabolism at different treatment in Chinese kale using full-length transcriptome sequencing
13    274    1
LtrDetector: A tool-suite for detecting long terminal repeat retrotransposons de-novo

LtrDetector: A tool-suite for detecting long terminal repeat retrotransposons de-novo
14    218    1
De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim

De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim
15    141    1
Transcriptomic de novo analysis of pitaya (Hylocereus polyrhizus) canker disease caused by Neoscytalidium dimidiatum

Transcriptomic de novo analysis of pitaya (Hylocereus polyrhizus) canker disease caused by Neoscytalidium dimidiatum
16    155    1
High contiguity de novo genome assembly and DNA modification analyses for the fungus fly, Sciara coprophila, using singlemolecule sequencing

High contiguity de novo genome assembly and DNA modification analyses for the fungus fly, Sciara coprophila, using singlemolecule sequencing
23    27    1
Elevated transcription of transposable elements is accompanied by het-siRNAdriven de novo DNA methylation in grapevine embryogenic callus

Elevated transcription of transposable elements is accompanied by het-siRNAdriven de novo DNA methylation in grapevine embryogenic callus
15    56    1
High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes

High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes
16    162    1
Development of polymorphic microsatellite markers by using de novo transcriptome assembly of Calanthe masuca and C. sinica (Orchidaceae)

Development of polymorphic microsatellite markers by using de novo transcriptome assembly of Calanthe masuca and C. sinica (Orchidaceae)
12    228    1
RNA-Seq transcriptome analysis of breast muscle in Pekin ducks supplemented with the dietary probiotic Clostridium butyricum

RNA-Seq transcriptome analysis of breast muscle in Pekin ducks supplemented with the dietary probiotic Clostridium butyricum
14    79    1
An improved approach for reconstructing consensus repeats from short sequence reads

An improved approach for reconstructing consensus repeats from short sequence reads
9    160    1
Nanopore sequencing and full genome de novo assembly of human cytomegalovirus TB40/E reveals clonal diversity and structural variations

Nanopore sequencing and full genome de novo assembly of human cytomegalovirus TB40/E reveals clonal diversity and structural variations
12    59    1
The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri

The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri
11    44    1
De novo assembly of middle-sized genome using MinION and Illumina sequencers

De novo assembly of middle-sized genome using MinION and Illumina sequencers
12    62    1
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